Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKKPIVVGVTGGSGSGKTSVTKAICNHFSGHSILMIAQDVYYHDQANISFEDRLKVNYDHPLAFDTDLLISHIAALRRYESIEKPIYDYAKYTRKKEVEIQEPREVIILEGILILEDKRLRDLMDIKVYVDTDDDIRFIRRLLRDMKERGRTMDSVIEQYLSVVKPMHNEFIEPTKKFADIIIPEGGENHVAIDLMTTKIESILQKHV
3W34 Chain:B ((5-196))
---KPFVIGIAGGTASGKTTLAQALARTL-GERVALLPMDHYYKDLGHLPLEERLRVNYDHPDAFDLALYLEHAQALLRGLPVEMPVYDFRAYTRSPRRTPVRPAPVVILEGILVLYPKELRDLMDLKVFVDADADERFIRRLKRDVLERGRSLEGVVAQYLEQVKPMHLHFVEPTKRYADVIVPRGGQNPVALEM-------------
General information:
TITO was launched using:
RESULT:
Template:
3W34.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96730 for 1500 contacts (-64.5/contact) +
2D Compatibility (PS) -20608 + (NN) -7027 + (LL) 1752
1D Compatibility (HY) -20400 + (ID) 4850
Total energy: -147863.0 ( -98.58 by residue)
QMean score : 0.396
(partial model without unconserved sides chains):
PDB file :
Tito_3W34.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W34-query.scw
PDB file :
Tito_Scwrl_3W34.pdb
: