Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKITTKGRYGLTITLELAKRIGDGPISLRSIAQDKNLSEHYLEQLIGPLRNAGIVKSIRGAHGGYVLNGDPEKITAGDIIRTLEGPIVLVESMEDEE------AAQRELWTRMRNAVRDVLDQTTLADLLKHSTDSELTDGYMFYI
4CIC Chain:B ((5-152))
LKVSTKGHYGVQAMFDLAQHFGEGPVSLKSIAERQGLSEPYLEQLIAVLRKAGLVKSVRGAQGGYILAREPRDIKVGDIIRVLEG------------SLKFDFSVTKSVWEKVKKSIEEVLDSITLADMLKDAEEAQMAQGYMYY-
General information:
TITO was launched using:
RESULT:
Template:
4CIC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59095 for 827 contacts (-71.5/contact) +
2D Compatibility (PS) -13699 + (NN) -5179 + (LL) 1348
1D Compatibility (HY) -15600 + (ID) 3150
Total energy: -95375.0 ( -115.33 by residue)
QMean score : 0.629
(partial model without unconserved sides chains):
PDB file :
Tito_4CIC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CIC-query.scw
PDB file :
Tito_Scwrl_4CIC.pdb
: