Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKTPFIISGIGLLGFIFFMTGVMTGAKWIQRFDHYWNSVIRVGITDTKTTVISYLTDIGGVATICILTAIIIIVFVFMRKVDTAIWFGSIVLIGGALIPSIIKNIVQRPRPTYK---------LIEQGGFSFPSGHSTGSTVFYGMLAFLLILYVSRSWLRFTIGILALGIVIFVMYSRVYLGVHFPSDVVAGFLIGNAALFSGIGCYFIWNEKLALWANKFKKA |
| 1D2T Chain:A ((109-214)) | -------------------------------------------------------------------------------------------------LATRSAKDHYMRIRPFAFYGVSTCNTQDKLSKNGSYPSGHTSIGWATALVLAEINPQRQ----------NEILKRGYELGQSRVICGYHWQSDVDAARVVGSAVVATLHTN-PAF-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53195 for 687 contacts (-77.4/contact) +
2D Compatibility (PS) -9271 + (NN) 1074 + (LL) 10480
1D Compatibility (HY) 4800 + (ID) 1200
Total energy: -47312.0 ( -68.87 by residue)
QMean score : 0.152
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