Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLIPLSLIIFLGFLAVLCLFDFVFRLYWFKYFLATMGLIASGVVFFISFYGGGMSQTEIAIAIFIGSFGEYVVSLII--SLVRFISRKSKKPKQKKKAKTA
3W9I Chain:A ((974-1030))
--------------------------------VMTSLAFILGVVPLAISTGAGSGSQHAIGTGVIGGMVTATVLAIFWVPLFYVAVSTL-------------
General information:
TITO was launched using:
RESULT:
Template:
3W9I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25068 for 281 contacts (-89.2/contact) +
2D Compatibility (PS) -5660 + (NN) 763 + (LL) 4404
1D Compatibility (HY) -4400 + (ID) 550
Total energy: -30511.0 ( -108.58 by residue)
QMean score : -0.003
(partial model without unconserved sides chains):
PDB file :
Tito_3W9I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W9I-query.scw
PDB file :
Tito_Scwrl_3W9I.pdb
: