Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSKFFIGMMTFLLSLICLTGMKAEAKSVGDISPDDISPEISDNRFQSAEGKVLPNFEVDMSISDQNNGKLSIDEDFELTSDGDIILIGTVQGQYIQGTPILNENGQLNKIPNRDQGIIMRVDRTTKKVEWARVVNYEDGNYNSQYAADKWFSSYKSITTNSSKSTFYVGGEVVNYYGDSGGGSTLIVKSIDANGNFQIAHKSYVSYGVPSRSDLTYAYFMDIQMEGNTLTMSASARYAAQGKQFIRYTLEPASLSITKNEFNPLDNTFWAKYQRTDVLKVDNKGLMAYNADVNGANQLKMSIRESENNYKEITLFDSVPEILANSSPYIFMEDRGDGNVFVVMSTPTTWYIALVNIASEQVVETKKMTMNSSTTLNSVIYSEGKGLLLGGSTHAEESIFGSEPLNKNNGYYLALGNDLNVTDSQILRTNQHNSLTTIINGVGNKVDGFFSYDGLNNDGYIQNVEYPNTYDVNPNGAMIFAEFNLQPAPVLDTGNPILAFYQGERRADFDELEGVKAYSGIDSSDVTKSITKNTFDLYTVGVQQQLYQIEYLPGSGNKTTGTRNVQLIHPLETPKLEKSYADSHGAFKVGEVVPANAIHAFNGLDSANNVTYVVTAVDDEKITVDASIKRTEGTKTAVINKEITLMTSTADETAVIDVTSVALAAGKYTSLTDVRNEGHFHIYAETMDSVSIDPKYVKLTEDPENPVDWNAPGVYYVTASLDPASGYTAKDVKVSVAVVDVGSPKVISVNMKPYNPTTALVVAEDDINGAGVYKINWAIKDANGLIIQQGVEESGATIRVQTPVPIDLSTLNDGNYTLSVSAADRIGHTSEASEKAFTVDRQAPVVTADDKITYEINTKKTEEEFLNDVNVKTEAGAVIKTNFDTMVRMDSPGDYTVLVEATDAAGNQ------------SDPIY-VIVTVEDTVAPIISADEAISYNQGNIRTEALFLTDIHATTDEPATITSDFADQVKFDTPGVYAVTLKANDISGNQAIPRTVNVTIKDVTAPVITADEAIIYEKGITKSATDFLTDIHATTNDGSAITSNFATVVDLNTPGDYDVTLSSTDTGGNISDPVTITVTVRDTTPPVITADTTITYEKGTTKTAAAFLTDVNATTNDGSAVTSNFNPISLKQVGTYQVTLSSVDENGNYALPVKVTVVVQDTQKPVISSSATSITYERGEKKQETGFFLDLAIKTDDGTPVTSDFDTAVNLDTAGTYTVTLNSEDESGNKADPVTITVTVADTEKPIITADTTITYAKGTTKTVAQFLTDIHATTNDGSTIISNFDPTVLAQEGTYTVVLNAKDESNNEADPVTVTITVVDTKGPIINALNAITYERTINKNEADFLADIEATTDDGSTITTDFNSKDLDTVGTYIVTLNAEDASGNKATPVKVTIKVEDTIPPIITADQSITYERGITKTEQAFYTDIKAATSDNSPISSDFSKIDLTKTGNYEVLLRATDQSGNKALPLKINVLVQDTIAPVIKTTSREITAERGTPMTEQQLLAKIGANTDDGSKITTDYNPAIVNTSGDYLVHLYAVDAAGNQAIPVEITIHVKDTTAPIIKADKKISYPVGTVKTVTEFLQDIHATTDDGSKITTDFDPNMLKTPGKYTIHLNAVDADGNKAKTIDVSLTVEEKVTPPKPPTPDDGGNNTNGSNGTNGSNTDITVNPTKQNTTATNESIPALGDTKSTIPVIVGMFLLATSLVLIRRK |
| 4L3A Chain:B ((308-440)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VSKTDFDNLEKME----YNARIDLSYQSYNTPEQFQNGGSYTISMPIYDHYFTVDHSLN--ITADSEKTYIENQLVTEATFLSDIHAKTDDGSTVTSDFADKVDFNTPGTYTVTLQSENNAGLKATPVQVNVTIKAKT--T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37611 for 676 contacts (-55.6/contact) +
2D Compatibility (PS) -13064 + (NN) -5048 + (LL) 84412
1D Compatibility (HY) -6400 + (ID) 2750
Total energy: 19539.0 ( 28.90 by residue)
QMean score : 0.376
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