Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGEKMAIWRTKKPATKQKIVSDLQELGIKKGDTIIFHASMSKAHWICGGPVTVILALQELVGELGNIVMPAQTGQLSDPAKWENPPVPESWWKIIRRETPPFDPLVTPT-RGMGVIAETFRTMPDVERSFHPYHSFCAWGKDKKQILANQPLAKSMGDESPLGKMYQLDAKIILFGVDNNNNTSLHLAEERSNAFPLIENQAAFLKNGEIIWEKYQEIDYNSEVFIALGRAYEKEHDFHPTTIIGAPTKIYDMRDLVDFGTKYFQTKNH |
| 2NYG Chain:E ((12-263)) | ------------PRTKQSITEDLKALGLKKGMTVLVHSSLSSIGWVNGGAVAVIQALIDVVTEEGTIVMPSQSVELSDPKEWGNPPVPEEWWDIIRESMPAYNSNYTPTTRGMGQIVELFRSYPEVKRSNHPNYSFVAWGKHKNKILNQHPLEFGLGEQSPLGKLYIRESYVLLLGADFDSSTCFHLAEYRIPYQKIINRGAPIIVEGKRVWKEYKELEFREELFQEVGQAFEAEHNMKVGKVGSANCRLFSLTEAVDFAEKWF----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NYG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110096 for 2106 contacts (-52.3/contact) +
2D Compatibility (PS) -26771 + (NN) -8065 + (LL) 1396
1D Compatibility (HY) -22400 + (ID) 5600
Total energy: -171536.0 ( -81.45 by residue)
QMean score : 0.480
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