Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNPTFHADKPIYSQISDWMKKQMITGEWKGEDKLPSVREMGVQLAVNPNTVSRAYQELERAGYIYAKRGMGSFVTSDKALFDQLKIELADAITERFLEEAKSIGLDDQAAIELLIKRSRNHE
3BY6 Chain:C ((10-80))
--------RPVYLQLVDRIKNEVATDVLSANDQLPSVRETALQEKINPNTVAKAYKELEAQKVIRTIPGKGTFITGNTA-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3BY6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22161 for 480 contacts (-46.2/contact) +
2D Compatibility (PS) -7557 + (NN) -1476 + (LL) 4360
1D Compatibility (HY) -4400 + (ID) 1500
Total energy: -32734.0 ( -68.20 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_3BY6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BY6-query.scw
PDB file :
Tito_Scwrl_3BY6.pdb
: