Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKQEEIIIAAQKWMQSHFEKETTGHDWEHIKRVWHLSKQIQVTEGGDKFAIELAALFHDYNDSKLTEDPLQATEIITTWLREKEIPEDVISKIIRIIQAVSFKNGKNPIQASTIEEKIVQDADRLDAIGAIGIARTFTYGGAHNREIANR----------D-HPENTTLQHFYDKLLLIQTQLKTKTGRELAGEKQIIMQDFIHALEKELKI |
3DTO Chain:A ((2-212)) | -NEQAILQSAEAWVKKQLMDE----DWYHIRRVTLMAKAIGEQEKVDVFVVQIAALFHDLID-------ETAKQQLIDWMEAAGVPSQKIDHTMDIINTI-----------ATREAMVVQDADRLDALGAIGIARTFAYSGNKGQPIYDPELPIRMTVEEYRHGKSTAINHFYEKLFKLKDLMNTETGKQLAKERHVFMEQFIERFLSEWN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DTO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 30489 for 1192 contacts (25.6/contact) +
2D Compatibility (PS) -17092 + (NN) 5288 + (LL) 608
1D Compatibility (HY) 5600 + (ID) 800
Total energy: 24093.0 ( 20.21 by residue)
QMean score : 0.070
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