Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIELDLPAYKDY----WNYAV-KKGYSGTAIFTKVEPLSVQYGLGIPEHDTEGRVITLEFEEFFMVTVYTPNSQAELKRLDYRMTFEDAILEYVKNLDNTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVLGSDHCPVELELNL |
| 2O3C Chain:C ((27-280)) | MKITSWNVDGLRAWVKKNGLDWVRKEDPDILCLQETKCAEKALPADITAMPEYPHKYWAGSEDKEGYSGVAMLCKTEPLNVTYGIGKEEHDKEGRVITAEFPDFFLVTAYVPNASRGLVRLDYRKTWDVDFRAYLCGLDARKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPEEREGFTQLLEAGFTDSFRELYPDQAYAYTFWTYMMNARSKNVGWRLDYFVLSSALLPGLCDSKIRNTAMGSDHCPITLFL-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2O3C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -141302 for 2121 contacts (-66.6/contact) +
2D Compatibility (PS) -26979 + (NN) -9568 + (LL) 96
1D Compatibility (HY) -24800 + (ID) 7050
Total energy: -209603.0 ( -98.82 by residue)
QMean score : 0.488
|
|
|