Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGIMNSLLKQKEMVVKDWLTYYVSVDDPYIFTLKNDHRLMDETGFVLENLFIGMTEDLGKMNAFARELGKAQFITSLGISRILFHIRLLEEFLLDYASEIKTKSANYRELYLFSIKLHQVFSSFTQNLIEGYTHANEQMIVQKENQIIKESTKLIWIAENVFLLPLIGKITDERAKQITETALFEVCE--QPVNYLIIDLSGVQLESPNIGKYIEYFFSSLKLVGVTPIITGMQPQTAKVMVQAN-LTEQHGIKTFATLRQATKTLMKEKEARNAHK |
| 2OOK Chain:A ((18-126)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------SVFFVTLKAIGTLTHEDYLVITPMLEGALSQVDQPKVSLFLDATELDGWDLRAAWDDLKLGLKHKSEFERVAILGNKDWQEWAAKIGSWFI-AGEIKYFEDEDDALKWLR---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OOK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46703 for 710 contacts (-65.8/contact) +
2D Compatibility (PS) -11170 + (NN) -1262 + (LL) 14684
1D Compatibility (HY) 3200 + (ID) 1000
Total energy: -42251.0 ( -59.51 by residue)
QMean score : 0.381
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