Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVHIEAKQGEIAETILLPGDPLRAKYIAETFLEDVVLFNQVRGMLGFTGTYKGEKVSVMGTGMGIPSISIYVNELIQSYDVKNLIRVGTMGGIQADVKVRDVVIAQAASTDSQINRNTFAGVDFAPVADFSLLKKAYDAGIEKGLSLKVGNVFSADRFYNDQLDK-QQLADYGVLGIEMEAAALYTLAQKYGRRALAILTVSDHIFTGEETSAEERQTTFNDMIVVALEAAIK
2AC7 Chain:B ((2-232))
-SVHIEAKQGEIAESILLPGDPLRAKYIAETFLEDVTCYNNVRGMLGFTGTYKGKRVSVQGTGMGVPSISIYVNELIQSYGVKNLIRVGTCGAIQKDVKVRDVIIAMTACTDSNMNRLTFPGFDFAPAANFDLLKKAYDAGTEKGLHVRVGNVLTADVFYRESMDMVKKLGDYGVLAVEMETTALYTLAAKYGVNALSVLTVSDHIF----------QTTFNEMIEIALDAA--
General information:
TITO was launched using:
RESULT:
Template:
2AC7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -182243 for 1983 contacts (-91.9/contact) +
2D Compatibility (PS) -23021 + (NN) -2985 + (LL) 1040
1D Compatibility (HY) -29200 + (ID) 8350
Total energy: -244759.0 ( -123.43 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_2AC7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AC7-query.scw
PDB file :
Tito_Scwrl_2AC7.pdb
: