Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTPSMEDYIEKIYSLIETKGYARVSDIADELFVHPSSVTKMVQKLDKDEYLIYEKYRGLILTPKGTQMGKRLLERHALLESFLSIIGVDPSHIYHDVEGIEHHLSWNSIDRIGDVVQFFENHPDALKTLKAMETTKPETKE
2F5F Chain:B ((2-134))
-TTPSMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDEYLIYEKYRGLVLTSKGKKIGKRLVYRHELLEQFLRIIGVDEEKIYNDVEGIEHHLSWNSIDRIGDLVQYFEEDDARKKDLKSIQ--------
General information:
TITO was launched using:
RESULT:
Template:
2F5F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69393 for 884 contacts (-78.5/contact) +
2D Compatibility (PS) -13706 + (NN) 1667 + (LL) 560
1D Compatibility (HY) -18400 + (ID) 5000
Total energy: -104272.0 ( -117.95 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_2F5F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F5F-query.scw
PDB file :
Tito_Scwrl_2F5F.pdb
: