Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFRTMMNGKIHRATVTEANLNYVGSITIDSAILEAVDMLPNEKVQIVNNNNGARIETYIIPGEPGSGVICLNGAAARHVQVGDVVIIMSYGMFTDEEAKTHEPKIVVLDEKNHIEMILPEEKAHTTL
4AZD Chain:B ((18-132))
MIRTMLQGKLHRVKVTHADLHYEGSCAIDQDFLDAAGILENEAIDIWNVTNGKRFSVYAIAAERGSRIISVNGAAAHCASVGDIVIIASFVTMPDEEARTWRPNVAYFEGDNEMK------------
General information:
TITO was launched using:
RESULT:
Template:
4AZD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72787 for 855 contacts (-85.1/contact) +
2D Compatibility (PS) -12920 + (NN) -4949 + (LL) 1188
1D Compatibility (HY) -10400 + (ID) 2600
Total energy: -102468.0 ( -119.85 by residue)
QMean score : 0.661
(partial model without unconserved sides chains):
PDB file :
Tito_4AZD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AZD-query.scw
PDB file :
Tito_Scwrl_4AZD.pdb
: