Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVAVSGFKGRMGHEVVKTVLREADLELVAVLDHEPKEKNINEMVEFSSLDVPVFGNLSEMLEEIKPDCVVDFTTPKVGYSNTKTILEHGVRAVVGTTGFTPEQISELRTIAESK-KIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIELHHDNKLDAPSGTGVKTAEMMAETREFVKQGAADEVELIEGARGAEYEGMRIHSVRLPGLVAHQEVIFGAEGQGLTIRHDSYDRISFMSGVALSVRKTKELETLIYGLENILD
1P9L Chain:B ((1-243))
MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDA---------------------GDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLD
General information:
TITO was launched using:
RESULT:
Template:
1P9L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109974 for 1948 contacts (-56.5/contact) +
2D Compatibility (PS) -25204 + (NN) -3750 + (LL) 1400
1D Compatibility (HY) -20000 + (ID) 5850
Total energy: -163378.0 ( -83.87 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_1P9L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P9L-query.scw
PDB file :
Tito_Scwrl_1P9L.pdb
: