Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANKTDLVNSVAELADLSKKDAAKAVEAVFETIQTSLSKGEKVQLIGFGNFEVRERAARKGRNPRTKEEIDIPASKVPAFKPGKALKEAVK
4QJU Chain:B ((2-90))
--NKTDLINAVAEQADLTKKEAGSAVDAVFESIQNSLAKGEKVQLIGFGNFEVRERAARKGRNPQTGKEIDIPASKVPAFKAGKALKDAVK
General information:
TITO was launched using:
RESULT:
Template:
4QJU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3300 for 464 contacts (7.1/contact) +
2D Compatibility (PS) -9285 + (NN) 1249 + (LL) 352
1D Compatibility (HY) -8000 + (ID) 3650
Total energy: -16034.0 ( -34.56 by residue)
QMean score : 0.522
(partial model without unconserved sides chains):
PDB file :
Tito_4QJU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QJU-query.scw
PDB file :
Tito_Scwrl_4QJU.pdb
: