Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGAKKPLFEVIASEIKDSINRDEYKTGMLMPNETALQEIFSSSRTTIRRAVDLLVEEGLVVRKNGVGLYVQPKLTSQNILEMTGVMKTDTNENLKKDIKDFYIRKAGKFYAEKFGIKENELVYSIKFVQKSENGVTLDRLILPLSLYPDLQAKDFQIINIIELVNSGKYKLFELEQELQLILAGNEQIKNMHINENDPVFKLSSVFYAENEMPIAIQYHYEDAESTKYVVDFN |
| 4U0Y Chain:D ((13-77)) | -----PIYYQIMEQLKTQIKNGELQPDMPLPSEREYAEQFGISRMTVRQALSNLVNEGLLYRLKGRGTFV------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U0Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40821 for 419 contacts (-97.4/contact) +
2D Compatibility (PS) -7052 + (NN) -865 + (LL) 12696
1D Compatibility (HY) -5200 + (ID) 1200
Total energy: -42442.0 ( -101.29 by residue)
QMean score : 0.678
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