Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDKTKRKMIYETFMLILILLSLALLPYRNNFTFILNWIIWVIFTLDYLVRLYRADNKWHYVKTHPFQLIAIIPFYGGFRAARIVSFVHLLSITAMGRRYIVPIYSFFRSNGLNRFLMIFVLLVIIIPVPMVFIEPEINNYPDALWWAIVTATTVGYGDIVPVTPIGRILASIMMLFGIAFIGMITSTITNFFRAKKPTNSSTQRANKITQLISETPDLTKEEIAVVEQFLTLRKKELADENTKSDSE
4H37 Chain:B ((14-99))
-------------------------------------------------------------------------------------------------------------NGLNRFLMIFVLLVIIIPVPMVFIEPEINNYPDALWWAIVTATTVGYGDIVPVTPIGRILASIMMLFGIAFIGMITSTITNFFRCK----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4H37.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71246 for 541 contacts (-131.7/contact) +
2D Compatibility (PS) -8773 + (NN) -1771 + (LL) 14372
1D Compatibility (HY) -18400 + (ID) 4250
Total energy: -90068.0 ( -166.48 by residue)
QMean score : 0.280
(partial model without unconserved sides chains):
PDB file :
Tito_4H37.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4H37-query.scw
PDB file :
Tito_Scwrl_4H37.pdb
: