Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDRILNNKWSIRIIALLLAAILFTSVNANNNNATTFSTTSSSDSEVIENVPVKVYYDKTNLYISGIPETVTVTLSGPRSIVQSAKAQQDFTVYADLKNASIGTQEVKLQVKDVSDRLKVKVNPATVNVNVQEKVTKKFSVDVELSKSVVADGYQAGTPIIDPKKVSITGAKDTIEQIAYVKATLESDGKHKSEFTDKATVSVFDSNLNKLDVEVNPQEVEVTVPVEKVGKSVPVKIKQEGTPESDIEISSMTPDKSEVVVVGDDAVLEKIKEIEIPIDVSKIKADTVKEVTVPVPTGAKSVQPTTIEVKIKTVKKSEANNNPTTSDSNNQDTDTTDNNTDDSGDNNTKISKSFSNMQVYMSGLKNTFDAQMITPANGKVSVTITGEKKTVDGIAAKDLSVIANLSKSKAGSYSIPLELNGLPDNVAY-VINPRQADFIITDKEASIEVPSKST |
2L3U Chain:A ((3-89)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLYDLPIVLRNLPEDLVLEKP-L--PEVSVTIRAYPEILNNLTKEQISLWIDATGKAVGEHTVKIYWQL-PAGIEMVSIPDVTYTLKAKED----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2L3U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20668 for 443 contacts (-46.7/contact) +
2D Compatibility (PS) -9200 + (NN) -780 + (LL) 22060
1D Compatibility (HY) -6000 + (ID) 500
Total energy: -15088.0 ( -34.06 by residue)
QMean score : 0.147
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