Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQSVFEDLYSKKILEEEFGYTCFLQTLIDNRIPYKKTRIPSNMILLTEDTINTKVYFIEKGIVSLEKNK--NVISFLGSNQIAGLNDYFMAEANLYTARVIETITAYEFDKEDIICSIIGMQEGWLYLYLNNRNHENVLIEKCN-LMRGNGENRLKESLEQLGRYFGNEKEGVLRIPKCFTKKIIANYSNLSVRSVTHLCRKLVEAGFLAENSKSFVLLDKYGKIEPEVTTI |
2GAU Chain:A ((29-225)) | -----------------------------LDKEIQPFPCKKASTVFSEGDIPNNLFYLYEGKIKILR--RFHISRIVKPGQFFGMRPYFAEETCSSTAIAVENSKVLAIPVEAIEALLKGNTSFCRYFLKALAKELGYAERRTVTLTQKHVRGRLAETLLILKENFGFEN-DGATLSIYLSREELATLSNMTVSNAIRTLSTFVSERMLALDGKRIKIIDCDRL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GAU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90027 for 1359 contacts (-66.2/contact) +
2D Compatibility (PS) -19854 + (NN) -198 + (LL) 3516
1D Compatibility (HY) -8000 + (ID) 1650
Total energy: -116213.0 ( -85.51 by residue)
QMean score : 0.283
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