Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILEEKREAAAEKGLKIYESFEAVLADEKVDAVLIATPNDSHKELAITALEAGKHVVCEKPVTMTSEDLLAIMDVAKKVNKHFMVHQNRRWDEDFLIIKEIFEQKTIGEMFHLESRVHGANGIPGDWRHLKAHGGGMVLDWGVHLLDQLLFLVDSNVKSVSANLSFALGDEVDDGFVTFITFENGITAQIEVGTTNFIKLPRWYVKGTEGTGIIHDWDLSGEIVQPTALAKTSEPTPIKAGQGLTKTMAPPSEEATNTLSLPAPAKLAPSFYNNFIDVLNNTSEPIVQNEEVYQVLKLIEAIFEAAETNRTIHSI |
| 3E18 Chain:B ((4-351)) | -KKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQNRRWDEDFLIIKEMFEQKTIGEMFHLESRVHGANGIPGDWRHLKAHGGGMVLDWGVHLLDQLLFLVDSNVKSVSANLSFALGDEVDDGFVTFITFENGITAQIEVGTTNFIKLPRWYVKGTEGTGIIHDWDLSGEIVKPT-------------------TMAPPSEEATNTLSLPAPAKLAPSFYNNFVDVLNNTSEPIVQNEEVYQVLKLIEAIFEAAETNRTVHSI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E18.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -234568 for 2759 contacts (-85.0/contact) +
2D Compatibility (PS) -36098 + (NN) -19540 + (LL) 1116
1D Compatibility (HY) -47200 + (ID) 16000
Total energy: -352290.0 ( -127.69 by residue)
QMean score : 0.668
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