Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRVTVWNEFLHEKEDDAVLAIYPDGIHGQIASFLEKAGIEAGTATLEEPEHGLTEEVLANTDVLIWWGHMGHDRVEDKIVDRVQKRVLEGMGLVVLHSGHMSKIFMRLMGTSCDLKWREANERERLWVVDPTHPIAKGIGEFIELDEEEMYGEHF-DIPTPDELIFLGWFEGGEVFRSGITYKRGNGRIFYFQPGHESYPTYHHPDIQQVIINGVHWCAEGRKNYPAYGNHQPLEKIGRK
1T0B Chain:A ((8-244))
-IRVVVWNEFRHEKKDEQVRAIYPEGMHTVIASYLAEAGFDAATAVLDEPEHGLTDEVLDRCDVLVWWGHIAHDEVKDEVVERVHRRVLEGMGLIVLHSGHFSKIFKKLMGTTCNLKWREADEKERLWVVAPGHPIVEGIGPYIELE-QEEMYGEFFDIPEPDETIFISWFEGGEVFRSGCTFTRGKGKIFYFRPGHETYPTYHHPDVLKVIANAVRWAAPVNRGEIVFGNVKPLEPIK--
General information:
TITO was launched using:
RESULT:
Template:
1T0B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -145987 for 1977 contacts (-73.8/contact) +
2D Compatibility (PS) -25670 + (NN) -14053 + (LL) 476
1D Compatibility (HY) -27200 + (ID) 7550
Total energy: -219984.0 ( -111.27 by residue)
QMean score : 0.579
(partial model without unconserved sides chains):
PDB file :
Tito_1T0B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T0B-query.scw
PDB file :
Tito_Scwrl_1T0B.pdb
: