Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGKLNGKVAVVTGAASGMGQQIAILFAKEGAKVVVADLNLEAAQKTVELVEKEHGTG---LAVVANVTKQEDIENMINQAIEAFGTLDILVNNAGIMDNFVPAGELTDELWDKVFAINTTGVMRATREALHIFEEKGQGVIVNIASAGGLFGSRAGAAYTASKHAVVGFTKNVGFQYANKNIRCNAIAPGAVNTNIGTTIYAPDEFGQERAMIGMGINPRAGDASEIAKVALFLASDDSSFVNGTVITADAGWTAY
4FN4 Chain:D ((5-252))---LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVEL-LE--DRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVNGDAVVVDGGLT--


General information:
TITO was launched using:
RESULT:

Template: 4FN4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130451 for 2203 contacts (-59.2/contact) +
2D Compatibility (PS) -26695 + (NN) -9682 + (LL) 544
1D Compatibility (HY) -19200 + (ID) 5050
Total energy: -190534.0 ( -86.49 by residue)
QMean score : 0.495

(partial model without unconserved sides chains):
PDB file : Tito_4FN4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FN4-query.scw
PDB file : Tito_Scwrl_4FN4.pdb: