Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKVLVFAAFIVLFSFSFLSTGLTAQAALKDGTYSVDYTVIQGDSDSASMANDYFDKPATVTVNGGKSTVSLQVNHSKWITGLWVEGNAVSVTSKNASSDTRKVSFPVSTLSNPVNAKIKVDIDD----DDLNYHHEYQIKLRFDEGSAKALAGAVKSSDNNTTTPATKSDSSNKVTNPKSSDSSQMFLYGIIFVATGAGLILLKRRAIFK
2O6P Chain:B ((6-119))
----------------------------------TLNYEVYKYNTNDTSIANDYFNKPAKYIKKNGKLYVQITVNHSHWITGMSIEGHKENIISKNTAKDERTSEFEVSKLNGKIDGKIDVYIDEKVNGKPFKYDHHYNITYKFNGPT---------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2O6P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48689 for 759 contacts (-64.1/contact) +
2D Compatibility (PS) -12323 + (NN) -4478 + (LL) 6736
1D Compatibility (HY) -10000 + (ID) 2150
Total energy: -70904.0 ( -93.42 by residue)
QMean score : 0.469
(partial model without unconserved sides chains):
PDB file :
Tito_2O6P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O6P-query.scw
PDB file :
Tito_Scwrl_2O6P.pdb
: