Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKVFITTGTEHYLRQLMANYTGGNVTLLQNFSQSLLYQESTGEKLFQEGAEYRVLQSSGSIKGFGVVVFEYIHLRDEEIPIFLQMYQRASLHFSETPGLQSTKLTKAMNM-NKFLIISFWDSEVFFHDWKKSPLSKEITNIMRKNNTQSGFSHEDIYHYPEFSHDAK |
2FB0 Chain:A ((3-83)) | ----------------------------------------------------------------SMIRLNVFVRVNETNREKAIEAAKELTACSLKEEGCIAYDTFESSTRRDVFMICETWQNAEVLAAHEKTAHFAQYVGIIQE----------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2FB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -39380 for 526 contacts (-74.9/contact) +
2D Compatibility (PS) -8672 + (NN) -3155 + (LL) 4964
1D Compatibility (HY) 0 + (ID) 300
Total energy: -46543.0 ( -88.48 by residue)
QMean score : 0.495
|
|
|