Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLEIQGLKKKYNGKWVIKGIDLTINEKECVALIGPNGAGKSTMINMIVQILTQDEGQITLDGESAKLV----REKIG--FLPQYPEFYGWMSATECLHFMGKLS----NMEKTDLKARINEVLLLVGLEESANKKISTYSGGMRQRLGIAQAILHRPELLVLDEPVSALDPIGRREMMLLLDKLK-KEITILFSTHILKDAEEICDRIAIIKNGELVADKTVVQLMEEESSPVFDVEFNGNSEAWQTLLLQNKYVEKIEKVGMVYQVYTTNQKAGSEAVLSSLLQIDGEFIRVENRHQSLEEIFMEKVGK |
| 4WBS Chain:B ((40-270)) | ---LVVRNLKKRYGSRTVVKDVSLDVKSGEVVGLLGPNGAGKTTSFYMIVGLVPLDAGEIDLDGKSISLLPIHKRASLGLSYLPQEASVFRKLSVEENIRAVLELQVGGKRLSKDAIASRTEALLDELQISHLRENPALSLSGGERRRVEIARALATNPSFILLDEPFAGVDPIAVLEIQKIVKFLKQRNIGVLITDHNVRETLGICDHAYIISDGSVLAAGAPGDIIENES-------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WBS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125102 for 1719 contacts (-72.8/contact) +
2D Compatibility (PS) -23420 + (NN) -7181 + (LL) 6744
1D Compatibility (HY) -19200 + (ID) 3650
Total energy: -171809.0 ( -99.95 by residue)
QMean score : 0.565
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