Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MNSDIIVADFWKNNEEILTDFDKDSFCESWTENEMWSIEFKVAQTPKNAHCYSFLD-YESSVYFRGQEFVVKQLSHDAVGKTLSKDIRAPHIYYTCQDGRQDDAITGSFTLEQCLTHIFKTDNRGFSWEIIDPSNILEKVQQENFGNNNYLTLIDQLLDDYGVVVIPDNRHLVFKPREIYGAKTENFIRYKYNTDEASFDIDTLSLKTKIKGYGKVDSNGNNYFSPITYTSPEVEKWGIRWQEPVSDERYTVAGNMQRRLKLELQDYPATTGSVI-LKNDYE-CEKGDYVLFIYEPLGIDYDVQIVAYKKYPFTIKAPEITLSNNKKSIVSIMAQLAKVLKGAK-- |
| 3BM3 Chain:A ((2-260)) | VRNLVIDITKKPTQNIPPTNEIIEEAITEL-----NVDELLDRLFEKDESGEVITPSRIAKML-----EEKAFEIYKEYEKQVREAYLSAGYSREKLEQSFQQARFSRG---GKAFEIIFTKLLNKFGIRYE----------HDRVIKIYDYITEGEKPA----------------FIIPSVRTFLNDPSS--------------AILITVKRKVRE---------------------------RWREAVGE-----AQILRNKFGDEINFWFVGFDEEFTIYSAIAMLDNGIDRVYVI-------DGRYDSLIEEIKRISDPNFNEDKYIQKIRRFSDIFDDIIQFLNKH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BM3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55040 for 1882 contacts (-29.2/contact) +
2D Compatibility (PS) -25299 + (NN) 3419 + (LL) 4612
1D Compatibility (HY) -7600 + (ID) 1200
Total energy: -81108.0 ( -43.10 by residue)
QMean score : 0.166
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