Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MSFILEVGSLADWVSGLATVGALFWAIKLNSNENRKRLTILFRHSFVSKKNG-----------IIISDGKPKVFIITPVNNSKFSLEINFRQILL-VPSLMDRLLFRAEPKKLSNIEALLK---QLENKANWQIIK-----------PNLSGEPIMFDYEFIVKQIKKYADGKR-------------FNFAIEIQFIDSTSKIFKHKEKLE----------------LRKIKGL------------------- |
| 4Q2E Chain:A ((29-290)) | ITASVVAPFVVLCFVSYESLIGLVSAILILAG-YELITLEMKERDARFFYVILLALYPVLYGLVFEEPTQPLSILFITGVVFSLITDKDPSQVFKTVAAFSIALIYVTFFLSFFLPIYRDFGAANALLVLTSTWVFDSFAYFTGLKFGRTRISPRYSPRKSLEGVIGGFLGVVIYTFLYRLVVNDLLSVNVICFRTFLPFAATVAIMDTFGDIFECALKRHYGVKDSGKTLPGHGGMLDRIDGLLFVAPVSYIVFKILEGVVR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q2E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41413 for 1281 contacts (-32.3/contact) +
2D Compatibility (PS) -18498 + (NN) -6974 + (LL) 176
1D Compatibility (HY) -14800 + (ID) 1800
Total energy: -83309.0 ( -65.03 by residue)
QMean score : 0.192
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