Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNIVLVCAAGMSTSLLVTKMRKAAEERGETCEIEAYSIAEVSNLIDDADVVLLGPQVRYQKKTVDELAAGKIPVDVIDMAAYGTMNGEKVLGQALDLINGFQK
1E2B Chain:A ((3-104))
KKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGPQIAYMLPEIQRLL-PNKPVEVIDSLLYGKVDGLGVLKAAVAAIKKAA-
General information:
TITO was launched using:
RESULT:
Template:
1E2B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85753 for 839 contacts (-102.2/contact) +
2D Compatibility (PS) -10989 + (NN) -3412 + (LL) 208
1D Compatibility (HY) -7600 + (ID) 2150
Total energy: -109696.0 ( -130.75 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_1E2B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E2B-query.scw
PDB file :
Tito_Scwrl_1E2B.pdb
: