Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LDKEKIVIQGARAHNLKNIDVEIPRDKLVVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDLIEGLSPAISIDQKTTSRNPRSTVGTVTEIHDYLRLLYARVGHPVCPNHGIEITSQTIEQMVDRVLEYPEKTRIQIMAPIVSGKKGTHKKTIEEIKKEGYVRIRVDGEIYDINDEIEIEKNKKHSIEIIIDRIVIKEGINTRLYDSIEAALRLADGYAVVDIMGDKELLFSEHYACPYC-GFSVGELEPRMFSFNSPFGACPTCDGLGTKLEVDVDTVIPDRSMSLNEGAIIPW-RPISSQYYPQMLASACKEFGIDMDTPLEKLSKEELDIILNGSKDKEFYFEYKNDFGMTRETWIPFEGILPNIERRYRETNSDFTRDQMAQYMTDLPCPSCKGYRLKEETLSVKV--NDH---HIGQISEFSINEALAFFDGLELSEKETQIAAPIFKEVRARLGFLKNVGLDYLTMSRAAGTLSGGEAQRIRLATQIGSRLTGVLYILDEPSIGLHQRDNDRLISTLQSMRDIGNTLIVVEHDEDTMMAADYLIDIGPGAGEHGGRIVAAGTPEEVANNKNSITGDYLSGKKFIPVPAKRRKGNGL-ELEIIGAKANNLKNVNAKIPLATFSCVTGVSGSGKSSLVNEVLRKALARKLNRNHAKPGEHKEIKGIENLEKIINIDQSPIGRTPRSNPATYTGAFDDIRDLFASTNEAKVRGYKKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCHGKRYNGETLDIRYKGKNIAEVLEMTVEEGLEYFTNQPRIARKLQTIVDVGLGYIRLGQPATTLSGGEAQRVKLASELHKRSNGKSFYILDEPTTGLHADDIGRLLKVLQRLVEENGDTVLVIEHNLDVIKQADYLIDLGPEGGDGGGQIIATGTPEKIARSKKSYTGKYLKPILERDKERTEERIATAKKK |
| 3ZQJ Chain:E ((24-974)) | ---DRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPHCP------ARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRVDGVVHPLTDPPKLKKQEKHDIEVVVD--------KRRLTDSVETALNLADGIVVLEFVDH--------LACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVVPDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPW--LPAKARKAILEGA-DEQVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRLKPEILAVTLAKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSRLGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDSITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGKSTLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGVFDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQGARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPAPTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDK-GNTVIVIEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVV----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -294967 for 7680 contacts (-38.4/contact) +
2D Compatibility (PS) -98504 + (NN) -31926 + (LL) 3784
1D Compatibility (HY) -96800 + (ID) 26650
Total energy: -545063.0 ( -70.97 by residue)
QMean score : 0.435
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