Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKGQVIQVMGPVVDVKFEGGNLPEIYNALVIEYKSDAEEAPTSQLTLEVAIQLGDDVVRTIAMASTDGVQRGMEVIDTGSPITVPVGTVTLGRVFNVLGNTIDLDEPLPSDIKRNKIHREAPTFDQLATTTEILETGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLTEQGIYPAVDPLASTSRALSPDIVGEEHYAVATEVQRLLQRYKELQDIIAILGMDELSDEDKQSVSRARRVQFFLSQNFHVAEQFTGQKGSYVPVKETVKGFKDLLAGKYDHIPEDAFRSVGRIEDVLEKAKDMGVEV |
4XD7 Chain:E ((12-480)) | -TRGRVIQV-GPVVDVKFENGHLPAIYNALKIQHKARNENEVDIDLTLEVALHLGDDTVRTIA-ASTDGLIRG-EVIDTGAPISVPVGEVTLGRVFNVLGEPIDLEGDIPADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHE-KDSGVISKTA-VFGQ-NEPPGAR-RVALTGLT-AEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGR-PSAVGYQPTLATE-GQLQERITSTAKGSITSIQAIYVPADDYTDPAPATTFSHLDATTNLERKLAE-GIYPAVDPLASTSRALAPEIVGEEHYQVARKVQQTLQRYKELQDIIAILG-DELSDEDKLVVHRARRIQFFLSQNFHVAEQFTGQPGSYVPVKETVRGFKEILEGKYDHLPEDAFRLVGRIEEVVEKAK-AG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XD7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163893 for 3841 contacts (-42.7/contact) +
2D Compatibility (PS) -48551 + (NN) -14072 + (LL) 3024
1D Compatibility (HY) -51600 + (ID) 18350
Total energy: -293442.0 ( -76.40 by residue)
QMean score : 0.453
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