Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPIVNMTDMLKKALAGKYAVGQFNINNLEWTQAILKAAEAEKAPVILGVSEGAAKYMGGFKTVVKMTEGLVEDLKITVPVAIHLDHGSSFDSCKAAIDAGFSSVMIDGSHHPIDENIAMTKQVVDYAHAKGVSVEAEIGTVGGDEDGVTG-GINYADPQECLRVVKEANIDALAAALGSVHGPYHGEPVLGFDEMKEISELTGAPLVLHGGSGIPEHQIKKAIELGHSKINVNTECQIVWTAAVREKLATDDKVYDPRKVIGPGVDAIIKTVTEKIQEFGSNGKA
4TO8 Chain:B ((2-285))-PLVSMKEMLIDAKENGYAVGQYNINNLEFTQAILEASQEENAPVILGVSEGAARYMSGFYTIVKMVEGLMHDLNITIPVAIHLDHGSSFEKCKEAIDAGFTSVMIDASHSPFEENVATTKKVVEYAHEKGVSVEAELGTVGG--DDVVADGIIYADPKECQELVEKTGIDALAPALGSVH------PKLGFKEMEEIGLSTGLPLVLHGGTGIPTKDIQKAIPFGTAKINVNTENQIASAKAVRDVLNNDKEVYDPRKYLGPAREAIKETVKGKIKEFGTSNRA


General information:
TITO was launched using:
RESULT:

Template: 4TO8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -146802 for 2449 contacts (-59.9/contact) +
2D Compatibility (PS) -30626 + (NN) -13819 + (LL) -8
1D Compatibility (HY) -28400 + (ID) 9050
Total energy: -228705.0 ( -93.39 by residue)
QMean score : 0.646

(partial model without unconserved sides chains):
PDB file : Tito_4TO8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4TO8-query.scw
PDB file : Tito_Scwrl_4TO8.pdb: