Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTVKLNNGVEVPILGFGTYQITDAAEAEHAVKDAIKAGYRHIDTAQSYMNEEAVGRGIAASG----VDRKELFITTKIWVENVSYKGVMSSFDRSLKRLGLDYVDLLLIHQPFNDVYGAWIAMEELQASGKIRAIGVSNFSPDRVIDLAAFNEVTPQVNQIEVNPFQQQTANLAILRKEGVAIEAWAPFAEGKNDIFNNPVLTKIGAKYGKSAAQVILRWLVEQDIIVLAKSVKPERMAQNLAIFDFELTEADKEEIAGLDQGESQFFSHADPEMVKWMASRKLNV
1VP5 Chain:B ((18-296))---VTLNNGVEMPILGYGVFQIP-PEKTEECVYEAIKVGYRLIDTAASYMNEEGVGRAIKRAIDEGIVRREELFVTTKLWVSDVGYESTKKAFEKSLKKLQLEYIDLYLIHQPFGDVHCAWKAMEEMYKDGLVRAIGVSNFYPDRLMDLMVHHEIVPAVNQIEIHPFYQRQEEIEFMRNYNIQPEAWGPFAEGRKNIFQNGVLRSIAEKYGKTVAQVILRWLTQKGIVAIPKTVRRERMKENISIFDFELTQEDMEKIATLDEGQSAFFSHRDPEVVKWICSL----


General information:
TITO was launched using:
RESULT:

Template: 1VP5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143090 for 2380 contacts (-60.1/contact) +
2D Compatibility (PS) -29532 + (NN) -13157 + (LL) 600
1D Compatibility (HY) -32000 + (ID) 7750
Total energy: -224929.0 ( -94.51 by residue)
QMean score : 0.585

(partial model without unconserved sides chains):
PDB file : Tito_1VP5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VP5-query.scw
PDB file : Tito_Scwrl_1VP5.pdb: