Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSIPSFLKLVEIQTKIASVFPFMLGTLFVVYQYDMFKPINTLIIFGSMLIFDLTTTAINNYMDYRKATDNHDYDYRTTSNVIGQEQIPVRTVIITIFLMFFIATGLGVWLVFRTDLLVLLIGFVCFCIGILYTFGPVPLSRMPLGEIFSGVTMGFGIFFLAVYVNAY--DAGIANLLWQGEMVTIQFNLIEIIRIGVVSLPCIFTIANIMLAN-NLCDLDEDIRNHRYTLPYYIGRKM---GVLLFNTLYYASFLAVVVSVAINFLHPIMLLSLITIYPVYRNLVKFNKEQVKSKTFVIGIRNFVLINATLTILMAVSVVLQQLT |
2BM8 Chain:A ((2-233)) | NDYSRQNFQ----------------------DLNLFRGLGEDPAYHPPV---LTDRPRDWPLDRWAEAPRDLGYSDFSPYQWRGLRMLKDPDTQAVYHDMLWELRPRTIVEL-------------------------------------GVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDNAHANTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRY--------------------------APQLFSEYLGAFRDVLSMDMLYANASSQLD-----RGVLRRVA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2BM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -207918 for 1633 contacts (-127.3/contact) +
2D Compatibility (PS) -22592 + (NN) 3916 + (LL) 9264
1D Compatibility (HY) -1600 + (ID) 950
Total energy: -219880.0 ( -134.65 by residue)
QMean score : 0.091
|
|
|