Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKLIFAIVQDQDSNRLSDALTKGNFGATKLATTGGFLKAGNTTFIIGTEDERVEDALAIIKENCKAREQMMTPSASLGVTVDTYVPYPIEVQVGGATVFVMPVESFHHF
4RWW Chain:C ((1-109))
MKLIFAIVQDQDSNRLSDALTKGNFGATKLATTGGFLKAGNTTFIIGTEDERVEDALAIIKENCKAREQMMTP---------TYVPYPIEVQVGGATVFVMPVESFHHF
General information:
TITO was launched using:
RESULT:
Template:
4RWW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55493 for 642 contacts (-86.4/contact) +
2D Compatibility (PS) -11191 + (NN) -5889 + (LL) 452
1D Compatibility (HY) -14000 + (ID) 4950
Total energy: -91071.0 ( -141.86 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_4RWW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RWW-query.scw
PDB file :
Tito_Scwrl_4RWW.pdb
: