Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKLNEALKKAERIVFLTGAGVSVPSGIPDYRSKNGLYAGMSSP----EYMLSHTCLVREPEKFYQFVTENMY-YPNAVPNVIHKKMAEIETEKDV-TIITQNIDGLHEKAGSKKVVNFHGSLYHCYCQNCGMTVTAKDYLK---SDIHT--DCGGVIRPDVVLYEEAISESAIDQSLTAIRKADLIVIVGTSFRVSPFCNLTDYRNKKARIFAVNKERISLPYPFEMMESDAVKVFEEI
4BV2 Chain:B ((3-199))
MKEFLDLLNESRLTVTLTGAGISTPSGIPDF-----------QNVFDIDFFYSH------PEEFYRFAKEGIFPMLQAKPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAGSKKVIELHGNVEEYYCVRCEKKYTVEDVIKKLE--VPLCDDCNSLIRPNIVFFGENLPQDALREAIGLSSRASLMIVLGSSLVVYPAAEL--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4BV2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102095 for 1275 contacts (-80.1/contact) +
2D Compatibility (PS) -19178 + (NN) -9689 + (LL) 4152
1D Compatibility (HY) -17600 + (ID) 3300
Total energy: -147710.0 ( -115.85 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_4BV2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BV2-query.scw
PDB file :
Tito_Scwrl_4BV2.pdb
: