Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNQTFIVKKEHISQYPNPLFVNKNESIWVFEEDTEYPGWIFCKVKSSGKEGWIPKQIIQISNDG---------------------------------------------------------------------------------------------------KSGTVSEDYSA---RELNVKPGDKLESNRE-LNGWVWCVTEENEAGWVPRENLEV |
| 1GRI Chain:A ((1-212)) | --MEAIAKYDFKATADDELSFKRGDILKV-------QNWYKAELN--GKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGA-CHGQTGMFPRNYVTP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GRI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36053 for 702 contacts (-51.4/contact) +
2D Compatibility (PS) -11230 + (NN) -4502 + (LL) 636
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -55399.0 ( -78.92 by residue)
QMean score : 0.349
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