Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLFLKELESNLTVSKLMELCFE--HPNYKDYCSVISTKKGEVLESLSPAGTKVYFVLSGIYGMIVEEDAEMEEESCKECIVRFLQKGDSFGLYHLFYDEW-SPHVSMQSLGHGEVMEVDSNFLFSIFDKKDENNFFMIKVMAEELREAHT-FAKLSFLKKEERIRKAILKCAQTLGTFSDNGILLPREITQEVLARYTNTSREYVAHTVMHLIKEDIIRNRPKPLLVMDKTRL
3DKW Chain:A ((1-223))
MEFQRVHQQLLQSHHLFEPLSPVQLQELLASSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTP------EGQEKILEVTNERNTFAEAMMFMDTPNYVA-TAQAVVPSQLFRFSNKAYLRQLQDNTPLALALLAKLSTRLHQRIDEIETLSLKNATHRVVRYLLTLAAHAPG---ENCRVEIPVAKQLVAGHLSIQPETFSRIMHRLGDEGIIHLDGREISILDRERL
General information:
TITO was launched using:
RESULT:
Template:
3DKW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73737 for 1411 contacts (-52.3/contact) +
2D Compatibility (PS) -23359 + (NN) -11812 + (LL) 988
1D Compatibility (HY) -12400 + (ID) 1550
Total energy: -121870.0 ( -86.37 by residue)
QMean score : 0.377
(partial model without unconserved sides chains):
PDB file :
Tito_3DKW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DKW-query.scw
PDB file :
Tito_Scwrl_3DKW.pdb
: