Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LTTETETIKPQLAELKANLTKRNLQYVMEVEKHLRETHYGEEQQEIIVYEMSEKILAEQKKGITARKLFNLTPTEYVVSLDVKAATVEQNTDKWWLVLDGGLLVLGAMMLISGISAYFQKNAQTLGIIVLLITAVVGGFAMLILRKYASNMRAGQKGGTIKYLLVAVGVIAVWMFVMTIVQVTIPPNINVALSPIVNTVGGAIIIALRFYVKKKKNIPSL |
1B5L Chain:A ((118-154)) | --------------------VTVKKYFQGIYDYLQEKGYSDCAWEIVRVEMMRALTV------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B5L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102 for 170 contacts (-0.6/contact) +
2D Compatibility (PS) -4192 + (NN) -2443 + (LL) 16136
1D Compatibility (HY) -2400 + (ID) 400
Total energy: 6599.0 ( 38.82 by residue)
QMean score : 0.490
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