Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIRNLTKKMDDNLVLKDVSFDLKAGEITALIGRNGVGKTTLFSTMTGIYLPDEGDVFLDEESIFKHPEVKQQ---LFFLEDNMNHFNTYSVQTVVKIYRQIYTTFD-------------EAFFNELMQQFELPMKAKLMSFSKGRKALFFIILAFSLNVRFLLLDEPLDGLDIIIKKQILATIKDTVKKRGTSVVIASHRLEELEAIADRVIVLKGASVELDYYLEDMRTDAVKIQVAFKTKKIPGFVKNNAQLLYRNGRIYTLLVTENASSFLAELRLEEPVLLEEMSISIEDIFTVHLANDKIDYYEI |
| 4WBS Chain:B ((42-256)) | --VRNLKKRYGSRTVVKDVSLDVKSGEVVGLLGPNGAGKTTSFYMIVGLVPLDAGEIDLDGKSISLLPIHKRASLGLSYLPQEASVFRKLSVEENIRAVLELQVG--GKRLSKDAIASRTEALLDEL--QISHLRENPALSLSGGERRRVEIARALATNPSFILLDEPFAGVDPIAVLEIQKIVK-FLKQRNIGVLITDHNVRETLGICDHAYIISDGSV------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WBS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155903 for 1528 contacts (-102.0/contact) +
2D Compatibility (PS) -21173 + (NN) -5581 + (LL) 8612
1D Compatibility (HY) -11600 + (ID) 3400
Total energy: -189045.0 ( -123.72 by residue)
QMean score : 0.590
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