Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLYIIANPHAGNKNASTIVGKIQELYHTEDISVFYTEQKDDEKKQVINILRSFKESDHLMIIGGDGTLSKVMTYLPQHIPCAYYPVGSGNDFARALKIPNLKETLTAIQTERLKEINCFIYDKGLILNSLDLGFAAYVVWKASNSKIKNILNRYRLGKITYIVIAIKSLLHSSKVQVLVEGETGQQIKLNDLYFFALAN--NTY----FGGGITIWPKASALTAELDMVYAKGHTFLKRLSILLSLVFKRHTTSKSIKHQTFKAMTVYFPKNSLIEIDGEIVEL-DQISLKCQKRYLYM |
| 1YT5 Chain:A ((1-235)) | MKIAILYREEREK-----EGEFLKEKISK-EHEVIEFG---E---ANAPG---RVTADLIVVVGGDGTVLKAAKKAADGTPMVGFKAGRLGFLTS-YTLDEIDRFLEDLRNWNFREE------TRWFIQIESELGNHLALNDVTL-E---------RDL------------SGKMVEIEVE-VEHHSSMWFFADGVVISTPTGSTAYSLSIGG----PIIFPECEVLEISPIAPQFFL-----------T-----RSVVIPSNFKVVVESQRDINMLVDGVLTGKTKRIEVKKSRRYVRI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YT5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124949 for 1818 contacts (-68.7/contact) +
2D Compatibility (PS) -23876 + (NN) 2608 + (LL) 5756
1D Compatibility (HY) -2400 + (ID) 1600
Total energy: -144461.0 ( -79.46 by residue)
QMean score : 0.445
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