Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLDKYLKVSRII-KRRPVAKEVADKGRVKVNGVL-AKSSTDLKLN--DQVEIRFGNKLLTVKVLEMKDSTKKEDAIKMYEIINETRIETDEQA
2CQJ Chain:A ((109-165))
RRLPTVLLKLRMAQHLQ-AAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFVTWVDSSK------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2CQJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10758 for 329 contacts (-32.7/contact) +
2D Compatibility (PS) -5435 + (NN) 1606 + (LL) 3420
1D Compatibility (HY) -1600 + (ID) 550
Total energy: -13317.0 ( -40.48 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_2CQJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CQJ-query.scw
PDB file :
Tito_Scwrl_2CQJ.pdb
: