Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNLIETIEHFLAYSDDKLEELADKNYQLRQTIVEKEKIESREK
3Q4F Chain:C ((120-150))
----AEVIRELICYCLDTIAENQAKNEHLQKENERLLRDWND--
General information:
TITO was launched using:
RESULT:
Template:
3Q4F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3666 for 114 contacts (32.2/contact) +
2D Compatibility (PS) -3335 + (NN) -1522 + (LL) 392
1D Compatibility (HY) -400 + (ID) 400
Total energy: -1599.0 ( -14.03 by residue)
QMean score : 0.587
(partial model without unconserved sides chains):
PDB file :
Tito_3Q4F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q4F-query.scw
PDB file :
Tito_Scwrl_3Q4F.pdb
: