Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLVKNLEIVESIFGDWDETIIWSCVQGIMGEVFVDSLDQPKSSLAKLGRKSSFGFLAGQPTLFLLEVCSGEDIILVPQHKGWSDLIESTYGQNAHSFKRYATKKDTLFERSRLEKFVTQLPNGFELRAIDEKVYNSCLEKEWSQDLVANYATYQYYKKQGIGYVVYYQGNIIAGASSYSTYKNGIEIEVDTHPDFRRRGLATIVAAQLILTCLDKGIYPSWDA---HTRTSLNLSEKLGYEFSHEYIAYEID |
| 2CNT Chain:A ((41-130)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------LNLKLTADDRMAAFAITQVVLDEATLFNIAVDPDFQRRGLGRMLLEHLIDELETRGVVTLWLEVRASNAAAIALYESLGFNEATIRRNYYPT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CNT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30823 for 534 contacts (-57.7/contact) +
2D Compatibility (PS) -9026 + (NN) -3802 + (LL) 11148
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -37803.0 ( -70.79 by residue)
QMean score : 0.358
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