Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIYDHLLNLTHYKDINPNLDLAIDYLLSHDLRNLDIGTYHISPEVILMVQSNQLSESFDHIFEYHKKYLDIHYVIEGHEVIKLGKGDKVEVEEYLGDIGFIKCSEETSFDLRDNYIAFFFPEEAHQPNGMGSLGNYVKKGVLKVLMA
2ARC Chain:A ((37-78))
------------------------------------------------------------------KGYILNLTIRGQGVVKNQG---------------------REFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRA
General information:
TITO was launched using:
RESULT:
Template:
2ARC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9230 for 206 contacts (-44.8/contact) +
2D Compatibility (PS) -4691 + (NN) -140 + (LL) 5856
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -11205.0 ( -54.39 by residue)
QMean score : 0.189
(partial model without unconserved sides chains):
PDB file :
Tito_2ARC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ARC-query.scw
PDB file :
Tito_Scwrl_2ARC.pdb
: