Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTIYDQIESALDLMTDLEREIACYFMGQPISKDALASTIVTKQLHISQAALTRFAKKCGFKGYREFVFEYLKSHETISQQLYGLQNDNTKKVFMNYQEMVSKSADIIDEEQLLEVSHMIEQADRVYFYGKGSSSLVAKEFKIRLMRLGVICEALDDT-DSFSWTNSIVNDRCLVIAFSLSGNTNSVIGALKIASSHGAKTVLFTKQPHTID-YAFDKIIQVASARHLDYGNRISPQIPMLIMVDIIYAQFLDINKIEKERIFRETIIQR |
3SHO Chain:A ((101-272)) | ----------------------------------------------------------------------------------------PVQVFTNDIENLNQTLNQTQPEAIEAAVEAI-RADHVIVVGMGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLANLRPTDLMIGVSVWRYLRDTVAALAGAAERGVPTMALTDSSVSPPARIADHVLVAATRG----VGHSLSPVGLIAVVNLLLAEIAVREPERALAVLREVDRLY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SHO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59000 for 1309 contacts (-45.1/contact) +
2D Compatibility (PS) -17611 + (NN) -4197 + (LL) 7612
1D Compatibility (HY) 8000 + (ID) 800
Total energy: -65996.0 ( -50.42 by residue)
QMean score : 0.350
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