Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKIIVHAFINSGKIGVVEVLFATSDDKLLMTKMSEFQRHYPGDYLAIYDLPLDTDLNKLSHYPSVAISKEDFHEEKANETNENS-
4CU5 Chain:A ((1-85))
MYKHTIVYDGEVDKISATVVGWGYNDGKILICDIKDYVPG-QTQNLYVVGGGACEKISSITKEKFIMIKGNDRFDTLYKALDFINR
General information:
TITO was launched using:
RESULT:
Template:
4CU5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25752 for 657 contacts (-39.2/contact) +
2D Compatibility (PS) -9099 + (NN) -2360 + (LL) 92
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -40069.0 ( -60.99 by residue)
QMean score : 0.261
(partial model without unconserved sides chains):
PDB file :
Tito_4CU5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CU5-query.scw
PDB file :
Tito_Scwrl_4CU5.pdb
: