Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKEDVIEIEGKVVETMPNAMFTVELENGHQILATVSGKIRKNYIRILVGDRVTVEMSPYDLTRGRITYRFK
2OQK Chain:A ((29-96))
---KEEGQEYGQVQRMLGNGRLDAYCFDGQKRLCHIRGKMRK-KVWVNPGDIVLVSLRDFQDSKGDIILKYT
General information:
TITO was launched using:
RESULT:
Template:
2OQK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32386 for 448 contacts (-72.3/contact) +
2D Compatibility (PS) -7161 + (NN) -1092 + (LL) 336
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -43053.0 ( -96.10 by residue)
QMean score : 0.436
(partial model without unconserved sides chains):
PDB file :
Tito_2OQK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OQK-query.scw
PDB file :
Tito_Scwrl_2OQK.pdb
: