Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKLRRFRFPLRFYFTLMFVLTMLFSVLASLLLVAAIVFTFFQGVLTTHVLQVSALAVVFLSLVIASISMWYGSYHLTKPILDISRIVSNVADGDFEGHIYRNSNRRKSYEYYNELDELSESINQMIVSLSHMDHMRKDFITNVSHELKTPIAAVANIVELLQDPEL-DEETQSELLGLVKTESLRLTRLCDTMLQMSRVDNQETIGELSSVRVDEQI-----RQAMISLTERWQAK--RINFQLDSKPYTVYSNSDLLMQVWINLLDNAIKYSDDIVDLRVRMEETNNHYLRVIISDKGRGISQYDVQHIFDKFYQADQ--SHNQQGNGLGLAIVKRIIVLCKGRISVSSQFEIGTEFCVELPLS |
| 4U7O Chain:B ((37-261)) | ------------------------------------------------------------------------------------------------------------------------------------------QFVSNVSHELRTPLTSLRSYIEALSDGAWKDPEVAPGFLKVTQEETDRMIRMINELLSLS------TRVDMELVNINEMFNYVLDRFDMILKKDDNPAKYYTIKREFTKRDLWVEIDTDKFTQVLDNIMNNAIKYSPDGGVVTCRLLETHNQVI-ISISDQGLGIPRADLGHVFDRFFRVDKAR---QGGTGLGLAISKEVVQMLGGRIWVDSVEGKGSTFYISLPYE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U7O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99587 for 1506 contacts (-66.1/contact) +
2D Compatibility (PS) -22311 + (NN) -12048 + (LL) 13240
1D Compatibility (HY) -17200 + (ID) 3750
Total energy: -141656.0 ( -94.06 by residue)
QMean score : 0.447
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