Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIPFTIEYIFVLIGAFLLSIILTPIIRVISLKVGAVDKPNARRINKVPMPSSGGLAI----FLSFVVTTLFFMPMAASRHFIEVS----YFH--YILPVII---GGLVVTTTGFIDDIFELRPRYKMLGIIIAAVIIWKFTHFRFDSFKI--PIGGPLLEFGPILTFFLTVLWIISITNAINLIDGLDG------LVSGVSIISLATMAVVSYFFLPKIDFFLTLTIVILIASIVGFFPYNYHPAIIYLGDAGALFIGFMIGVLSLQGLKNSTAVAVITPVII-LGVPILDTAVAIVRRKLSGKKISEADKMHLHHRLLSMGFTHRGAVLVVYGIAIIFSLIALLLNVSS-RIGGIFLLLALLLAMEIFIEGLNIWGENRTPLFNLLKFIGNSDYRQSVIAKYSDKHQK---- |
| 4NZR Chain:M ((26-416)) | -NDGSYQSEIDLSGGANFREKFRNFANELSEAITNSPKGLDR---PVPKTEISGLIKTGDNFITPSFKAGYYDHVASDGSLLSYYQSTEYFNNRVLMPILQTTNGTLMANNRG-YDDVFRQVPSFSGWSNT-KATTVSTSNNLTYDKWTYFAAKGSPLYDSYPNHFFEDVKTLAIDAKDISALKTTIDSEKPTYLIIRGLSGNGSQLNELQLPESVKKVSLYGDYTGVNVAKQI-----FANVVELEFYSTSKANSFGF-----------NPLVLGSKTNVIYDLFASKPFTHIDLTQVTLQNSDNSAIDANKLKQAVGDIYNYRRFERQFQGYFAGGYIDKYLVKNVNTNKDSDDDLVYRSLKELNLHLEEAYREGDNTYYRVNENYYPGASIYENERASRDSEFQNEILKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NZR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -351254 for 2736 contacts (-128.4/contact) +
2D Compatibility (PS) -38248 + (NN) 1606 + (LL) 1856
1D Compatibility (HY) 1200 + (ID) 3250
Total energy: -388090.0 ( -141.85 by residue)
QMean score : 0.201
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