Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALSKLDNLYMAVVADHSKHPHHHGFLEGVEQV-QLNNPTCGDVISLSVKFDGNIISDIAFAGNGCTISTASSSMMTDAVIGKTKEEALQLADVFSKMVQGDQNPKQEKLGDAEFLAGVSKFPQRIKCATLSWNALRKAIERDNQAEL
4EB5 Chain:D ((2-114))
---------YSDKVFDHFQNPRNVGKIEDADGVGTVGNPVCGDLMTIYIKVKDNRIEDIKFQTFGCAAAIATSSMATEMAKGKTIEEALKIT----------------RDAVAEALGGLPK--QKMHCSNLAADALRRAIVDYFRKNG
General information:
TITO was launched using:
RESULT:
Template:
4EB5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58517 for 907 contacts (-64.5/contact) +
2D Compatibility (PS) -11700 + (NN) -2006 + (LL) 1496
1D Compatibility (HY) -5200 + (ID) 2300
Total energy: -78227.0 ( -86.25 by residue)
QMean score : 0.344
(partial model without unconserved sides chains):
PDB file :
Tito_4EB5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EB5-query.scw
PDB file :
Tito_Scwrl_4EB5.pdb
: